England is the seventh of 16 competing countries at the European Championship to be charged by UEFA for disciplinary offences.
UEFA said in a statement Sunday the attempted invasion of the field at the Olympic Stadium in Kyiv on Friday was "inappropriate behaviour."
Fans celebrating an England goal were seen running from the stands on to the track circling the pitch before being intercepted by stewards.
UEFA's control and disciplinary body will hear the case on Wednesday. England is likely to get a small financial penalty.